VCAA Biology How are biochemical pathways regulated?
13 sample questions with marking guides and sample answers
Biomass can be used to produce bioethanol. The production of bioethanol is a process that has many steps.
In this process
bioethanol is the only product produced.
an environment free of microorganisms is required.
the same enzyme catalyses each step in the process.
the biomass could be plants containing high levels of cellulose.
Reveal Answer
bioethanol is the only product produced.
The fermentation process that produces bioethanol also produces carbon dioxide () as a byproduct, so bioethanol is not the only product.
an environment free of microorganisms is required.
Microorganisms, such as yeast or specific bacteria, are essential to carry out the fermentation step that converts sugars into bioethanol.
the same enzyme catalyses each step in the process.
The production of bioethanol involves multiple biochemical steps, each requiring specific, different enzymes (e.g., cellulase to break down cellulose, and various enzymes for fermentation).
the biomass could be plants containing high levels of cellulose.
Plants with high levels of cellulose are a common source of biomass, as the cellulose can be broken down into glucose sugars and subsequently fermented into bioethanol.
Where in a plant leaf cell does a light-dependent reaction occur?
stroma
mitochondrion
thylakoid membrane
chloroplast inner membrane
Reveal Answer
stroma
Incorrect. The stroma is the fluid-filled space inside the chloroplast where the light-independent reactions (Calvin cycle) take place, not the light-dependent ones.
mitochondrion
Incorrect. Mitochondria are the organelles responsible for cellular respiration and ATP production from glucose, not photosynthesis.
thylakoid membrane
Correct. The light-dependent reactions occur in the thylakoid membrane, which contains the chlorophyll and protein complexes (photosystems) needed to capture light energy.
chloroplast inner membrane
Incorrect. Although chloroplasts have an inner membrane, the light-dependent reactions specifically occur on the thylakoid membranes suspended within the chloroplast.
Which one of the following statements about the electron transport chain is correct?
The outputs of the electron transport chain are water, ATP and NADH. The role of water is to donate energy.
The outputs of the electron transport chain are oxygen, ATP and NAD. The role of oxygen is to accept energy from ATP molecules.
The outputs of the electron transport chain are water, ATP and NAD. The role of NADH is to donate electrons and hydrogen ions.
The outputs of the electron transport chain are oxygen, ATP and NADP. The role of NADP is to accept electrons from the electron transport chain.
Reveal Answer
The outputs of the electron transport chain are water, ATP and NADH. The role of water is to donate energy.
NADH is an input to the electron transport chain, not an output, as it gets oxidized to NAD. Additionally, water is a byproduct formed when oxygen accepts electrons, not an energy donor.
The outputs of the electron transport chain are oxygen, ATP and NAD. The role of oxygen is to accept energy from ATP molecules.
Oxygen is an input (the final electron acceptor), not an output. Its role is to pull electrons down the chain and combine with hydrogen ions to form water, not to accept energy from ATP.
The outputs of the electron transport chain are water, ATP and NAD. The role of NADH is to donate electrons and hydrogen ions.
This is correct because NADH donates electrons and protons to the chain, becoming oxidized to NAD. The process drives ATP synthesis and reduces oxygen to form water as final outputs.
The outputs of the electron transport chain are oxygen, ATP and NADP. The role of NADP is to accept electrons from the electron transport chain.
NADP is an electron carrier involved in photosynthesis, not the cellular respiration electron transport chain. Furthermore, oxygen is an input to this process, not an output.
ATP synthase is an enzyme that is used in the formation of ATP.
A competitive inhibitor to ATP synthase is introduced into a cell.
The competitive inhibitor would initially
bind to the active site of ATP, blocking it from binding to ATP synthase.
reduce the number of ADP molecules available for moving cellular energy.
bind to the allosteric site of ATP synthase, preventing ADP from binding.
cause more ADP molecules to be present in the cell.
Reveal Answer
bind to the active site of ATP, blocking it from binding to ATP synthase.
A competitive inhibitor binds to the active site of the enzyme (ATP synthase), not to the product (ATP).
reduce the number of ADP molecules available for moving cellular energy.
Inhibiting ATP synthase prevents the conversion of ADP to ATP, which would actually increase the amount of ADP present, not reduce it.
bind to the allosteric site of ATP synthase, preventing ADP from binding.
Competitive inhibitors bind directly to the active site of an enzyme. Inhibitors that bind to an allosteric site are known as non-competitive inhibitors.
cause more ADP molecules to be present in the cell.
By inhibiting ATP synthase, the enzyme can no longer convert ADP and inorganic phosphate into ATP, leading to an initial accumulation of ADP molecules in the cell.
Three factors that affect the rate of photosynthesis in plants are stated below:
- Factor 1 – light intensity
- Factor 2 – carbon dioxide concentration
- Factor 3 – temperature
Scientific data consistently shows specific trends for each factor when other variables are controlled.
Graphs were plotted showing the rate of photosynthesis against an increasing change in each factor.
If plotted over a large range, which of the following would show graphs with the same trend?
factors 1 and 2
factors 1 and 3
factors 2 and 3
factors 1, 2 and 3
Reveal Answer
factors 1 and 2
Both light intensity and carbon dioxide concentration show the same trend: the rate of photosynthesis increases initially and then plateaus when another factor becomes limiting.
factors 1 and 3
Temperature shows a different trend than light intensity; it increases to an optimum point and then rapidly decreases as enzymes denature, whereas light intensity plateaus.
factors 2 and 3
Temperature increases to an optimum and then decreases due to enzyme denaturation, which is a different trend from carbon dioxide concentration, which simply plateaus.
factors 1, 2 and 3
Temperature has a distinct peak and decline curve due to enzyme denaturation, which differs from the plateauing curves of light intensity and carbon dioxide concentration.
Scientists measured the metabolic activity of mammalian cells by measuring the uptake of glucose into the cells. The cells were maintained at 37 °C with a pH of 7.4 and suspended in a nutrient solution containing glucose. The uptake of glucose into the cells was recorded for the next 30 minutes.
Explain why the uptake of glucose into the cells could be used to measure the metabolic activity of the cells.
Reveal Answer
Glucose is used in aerobic respiration and ATP is produced from glucose for metabolism.
| Descriptor | Marks |
|---|---|
States that glucose is used in aerobic respiration | 1 |
States that ATP is produced from glucose for metabolism | 1 |
The scientists repeated the experiment. They kept all conditions the same as for the first experiment, except that the cells were kept in low-oxygen conditions.
Would the uptake of glucose into the cells be expected to be higher, lower or the same as for the first experiment? Justify your response.
Reveal Answer
Higher uptake
- With less oxygen the cell would not respire aerobically producing less ATP for each glucose molecule.
- The cell would take up more glucose to get the same amount of energy.
| Descriptor | Marks |
|---|---|
Identifies higher uptake | 1 |
States that with less oxygen the cell would not respire aerobically | 1 |
States this produces less ATP for each glucose molecule | 1 |
Concludes the cell would take up more glucose to get the same amount of energy | 1 |
During photosynthesis
ATP and NADH created in the light-independent stage are transported to the chloroplasts’ thylakoid membranes.
ADP and NADH are used in the electron transport chain after being created in the light-dependent stage.
ATP and NADPH are created in the grana of the chloroplasts and are used in the light-independent stage.
ADP and NADPH are created during the Krebs cycle and carried to the stroma of the chloroplasts.
Reveal Answer
ATP and NADH created in the light-independent stage are transported to the chloroplasts’ thylakoid membranes.
ATP and NADPH (not NADH) are produced during the light-dependent stage in the thylakoid membranes, and they are transported to the stroma for the light-independent stage.
ADP and NADH are used in the electron transport chain after being created in the light-dependent stage.
Photosynthesis utilizes NADPH, not NADH. Furthermore, the light-dependent stage produces ATP and NADPH, rather than ADP.
ATP and NADPH are created in the grana of the chloroplasts and are used in the light-independent stage.
The light-dependent reactions occur in the grana (stacks of thylakoids) to produce ATP and NADPH, which are then used to power the light-independent reactions (Calvin cycle) in the stroma.
ADP and NADPH are created during the Krebs cycle and carried to the stroma of the chloroplasts.
The Krebs cycle is a stage of cellular respiration that occurs in the mitochondria, not a part of photosynthesis.
A student notices that many plants grow in a way that reduces the overlap of their leaves.
This adaptation allows a faster rate of photosynthesis in the plants as the plants can absorb more
carbon dioxide into the bundle sheath cells.
glucose through the mesophyll cell wall.
oxygen from the air.
light on the grana.
Reveal Answer
carbon dioxide into the bundle sheath cells.
While carbon dioxide is required for photosynthesis, reducing leaf overlap primarily serves to maximize light exposure rather than directly increasing gas exchange.
glucose through the mesophyll cell wall.
Glucose is a product synthesized during photosynthesis, not a reactant that the plant absorbs from its environment.
oxygen from the air.
Oxygen is a byproduct of photosynthesis, not a reactant that needs to be absorbed to increase the rate of the process.
light on the grana.
Reducing leaf overlap maximizes the surface area exposed to sunlight, allowing more light to be absorbed by the chlorophyll located in the grana of the chloroplasts.
During cellular respiration
cells will consistently yield 36 or 38 molecules of ATP from each molecule of glucose.
there is a difference between the theoretical and actual ATP yields when cells break down glucose.
ATP is not produced in the cells in the roots of plants as these cells have no glucose source.
C4 plants consistently produce more ATP from each glucose molecule compared to C3 plants.
Reveal Answer
cells will consistently yield 36 or 38 molecules of ATP from each molecule of glucose.
While 36 to 38 ATP is often taught as the theoretical maximum yield per glucose molecule, cells rarely achieve this consistently due to proton leakage and the energy costs of transporting molecules into the mitochondria.
there is a difference between the theoretical and actual ATP yields when cells break down glucose.
The actual ATP yield (typically around 30-32 ATP) is lower than the theoretical maximum (36-38 ATP) because the proton gradient is also used to drive other transport processes, and some protons leak across the inner mitochondrial membrane.
ATP is not produced in the cells in the roots of plants as these cells have no glucose source.
Plant root cells actively perform cellular respiration to produce ATP. They receive the necessary glucose (transported as sucrose) from the photosynthetic leaves via the plant's phloem.
C4 plants consistently produce more ATP from each glucose molecule compared to C3 plants.
C3 and C4 designations refer to different photosynthetic pathways for carbon fixation, not cellular respiration. Both types of plants use the same general cellular respiration pathways to break down glucose.
Enzymes are associated with the biochemical pathways of cellular respiration and photosynthesis.
Consider a cell that carries out both cellular respiration and photosynthesis.
Which one of the following is a correct statement about the enzymes associated with these pathways?
Both pathways are catalysed by the same enzymes.
An increase in pH above the optimal pH for cellular respiration may cause the enzymes to denature.
The rates of these biochemical pathway reactions are not affected by changes in the concentrations of the enzymes.
A decrease in temperature below the optimal temperature for photosynthesis will cause the enzymes to denature.
Reveal Answer
Both pathways are catalysed by the same enzymes.
Enzymes are highly specific to their substrates. Because cellular respiration and photosynthesis involve different chemical reactions and substrates, they require different specific enzymes.
An increase in pH above the optimal pH for cellular respiration may cause the enzymes to denature.
Enzymes have an optimal pH range for their activity. A significant increase in pH beyond this optimal level can disrupt the bonds maintaining the enzyme's 3D structure, causing it to denature.
The rates of these biochemical pathway reactions are not affected by changes in the concentrations of the enzymes.
The rate of a biochemical reaction is directly affected by enzyme concentration. Increasing enzyme concentration will increase the reaction rate, provided there is excess substrate available.
A decrease in temperature below the optimal temperature for photosynthesis will cause the enzymes to denature.
Decreasing the temperature below the optimal level reduces kinetic energy and slows down the reaction rate, but it does not cause enzymes to denature. Denaturation is typically caused by high temperatures or extreme pH changes.
Which one of the following statements about the Calvin cycle is correct?
It is light-independent.
It requires glucose as an input.
It only occurs in complete darkness.
It only occurs when the humidity is high.
Reveal Answer
It is light-independent.
The Calvin cycle is known as the light-independent reactions because it does not directly require photons, instead using ATP and NADPH from the light-dependent reactions to fix carbon.
It requires glucose as an input.
The Calvin cycle produces sugar (specifically G3P, which forms glucose) rather than consuming it. Its actual inputs are , ATP, and NADPH.
It only occurs in complete darkness.
While sometimes called the dark reactions, the Calvin cycle actually occurs mostly during the day because it relies on the ATP and NADPH continuously generated by the light-dependent reactions.
It only occurs when the humidity is high.
The Calvin cycle does not require high humidity to function. However, very low humidity might cause a plant to close its stomata, indirectly slowing the cycle by restricting intake.
Which molecules are involved in a light-independent reaction?
oxygen, ADP and NADH
oxygen, ADP and NADPH
carbon dioxide, ATP and NADH
carbon dioxide, ATP and NADPH
Reveal Answer
oxygen, ADP and NADH
Oxygen is a byproduct of the light-dependent reactions, not a reactant in the light-independent reactions. Additionally, photosynthesis uses NADPH, not NADH.
oxygen, ADP and NADPH
Oxygen is produced during the light-dependent reactions, not used in the light-independent reactions. Also, the cycle consumes ATP rather than ADP to build sugars.
carbon dioxide, ATP and NADH
While carbon dioxide and ATP are correct inputs, the light-independent reactions use NADPH as a reducing agent, whereas NADH is primarily involved in cellular respiration.
carbon dioxide, ATP and NADPH
The light-independent reactions (Calvin cycle) require carbon dioxide as a carbon source, and utilize ATP and NADPH from the light-dependent reactions to synthesize sugars.
Wheat is a cereal crop grown extensively in Australia. The starch found within the wheat grain is used to produce wheat flour. Wheat flour is used to make a variety of foods.
Scientists are investigating ways to improve wheat crop yields. It is known that both the weight and protein content of a wheat grain are under genetic control. The scientists designed a single guide RNA (sgRNA) molecule and used CRISPR-Cas9 technology to edit the gene associated with grain weight. After editing, the gene was not expressed. When grown, the gene-edited wheat plants showed both an increase in grain weight and an increase in protein content.
Explain how the scientists would have designed the sgRNA molecule and outline the function of sgRNA in the editing of the gene.
Reveal Answer
Scientists identify a gene that acts as a template and create a complementary sgRNA strand that binds with Cas9. sgRNA then guides Cas9 to the target gene.
| Descriptor | Marks |
|---|---|
Identifies that scientists identify a target gene that acts as a template | 1 |
Explains that scientists create a complementary sgRNA strand that binds with Cas9 | 1 |
Outlines that the sgRNA guides Cas9 to the target gene | 1 |
The scientists noted that the lack of gene expression could have resulted from either the insertion of a nucleotide into the gene or the deletion of seven nucleotides from the gene.
Explain how each of these two different gene edits could have caused the lack of gene expression.
Reveal Answer
The codon sequence changes, leading to amino acid sequence changes and an early stop codon or a non-functional protein produced.
| Descriptor | Marks |
|---|---|
Explains that the insertion or deletion causes a frameshift mutation, changing the codon sequence | 1 |
States that this leads to changes in the amino acid sequence | 1 |
Concludes that this results in an early stop codon or the production of a non-functional protein | 1 |
Starch from the wheat grain can be used to manufacture bioethanol. In this process, Zymomonas mobilis bacteria and enzymes that break down starch into monosaccharides are added to the starch. Z. mobilis is a facultative anaerobic bacterium.
Explain how Z. mobilis is used in the manufacture of bioethanol.
Reveal Answer
The manufacture of bioethanol arises from the production of ethanol through anaerobic fermentation. This process involves the breakdown of glucose into ethanol in the absence of oxygen.
| Descriptor | Marks |
|---|---|
Identifies that bioethanol is manufactured through anaerobic fermentation | 1 |
Explains that this process involves the breakdown of glucose into ethanol in the absence of oxygen | 1 |